Disease A B C D E F G H I J K L M N O P Q R S T U V W X Y Z [0-9]
Gene A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

IL6ST

Gene name: interleukin 6 signal transducer
OMIM ID: 600694
Chromosome location: 5q11.2

Polymorphisms

Disease/PhenotypeInflammatory bowel disease (Crohn disease) 1
Reference transcriptNM_001190981.1
DNA Changec.442G>C
A.A. Changep.Gly148Arg
Exon/Intronexon 5
Variation Typesubstitution
Reference SNPrs2228044
Cases199 IBD patients
Controls311 healthy controls
Frequency
Allele/GenotypeFrequency in casesFrequency in controlsOR (95%CI)P-value
CC9 (4.64%)15 (4.82%)
CG58 (29.90%)109 (35.05%)0.79 (0.54-1.15) (Dominant)0.22
GG127 (65.46%)187 (60.13%)0.96 (0.41-2.23) (Recessive)0.92
ReferenceSenhaji N, Serrano A, Badre W, Serbati N, Karkouri M, Zaid Y, Nadifi S, Martin J. Association of inflammatory cytokine gene polymorphisms with inflammatory bowel disease in a Moroccan cohort.
Genes Immun. 2016 Jan-Feb;17(1):60-5. doi: 10.1038/gene.2015.52. Epub 2015 Dec 3.